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Thousands of cases of the most infectious variant of the coronavirus have been detected in the UK, according to the scientists, who said it had clearly spread beyond areas under the most severe level 4 restrictions.
The latest genetic surveillance suggests that the new strain spread rapidly from Kent and London in late September and reached the South West, the Midlands and the North of England, although London, the South East and the East of England are still by far the most affected regions.
“It is certainly not the case that this is completely geographically limited in what the current level 4 area is,” said Dr. Jeffrey Barrett, a statistical geneticist working on Covid-19 at the Wellcome Trust’s Sanger Institute near Cambridge.
Professor Tom Connor, a consultant bioinformatician at Cardiff University, said that genetic sequencing had detected the new variant, called B117, in North and South Wales based on its spread across the country. “The sequence data clearly shows that there are cases across the UK,” he said.
Geneticists monitoring the spread and evolution of the virus have collected more than 3,100 B117 sequences from across the country, although some may be duplicated. More than 2,500 have come from positive Covid tests in London, Kent, Essex and Norwich, with the rest scattered across the UK.
There are strong indications that the new hyper-infectious strain of Covid-19 has reached Cumbria, according to the county’s director of public health. Infections in the Eden district, which is just 20 miles from the Scottish border, have “skyrocketed,” according to Colin Cox, director of public health.
He said he suspected the new variant was involved, due to the “very, very high hit rate.” Eden, which includes the market town of Penrith, had experienced workplace outbreaks in which 50% of staff had been infected, “despite having good Covid controls,” he said.
Cumbria is at level 2, the second lowest level of restrictions. Some areas of the county, like Copeland in the west, still have one of the lowest infection rates in England.
Cox said that it has not yet been confirmed that Eden’s outbreaks were definitely caused by the new strain and that it had not yet been tested by full genomic typing. But a particular biochemical marker had appeared in the new shoots that was “at least highly suggestive of being the new variant,” he said.
“We have a couple of outbreaks in workplaces with more than 100 people in them, where almost half are getting infected. We have seen big outbreaks in schools, ”Cox said. “Wherever we are seeing outbreaks, we are seeing them affecting a large proportion of the people who may have been exposed.”
He said it was concerning “not because the new variant is more dangerous, but because it spreads faster, so it is more likely to reach more people. And so, yes, it is a concern. But I think, given the increase in transmissibility that we see in these new variants, it is probably everywhere pretty quickly. I don’t think there are many places that are going to resist. “